Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015804005.1_cds_XP_016487072.1_7743
CDS Infomation

[gene=LOC107807237] [db_xref=GeneID:107807237] [protein=COP9 signalosome complex subunit 2-like] [protein_id=XP_016487072.1] [location=complement(join(59912..60002,60097..60209,60538..60672,60771..60861,60977..61045,63626..63813,68332..68466,68547..68621,68727..68967,69920..69998,71145..71237,71339..71348))] [gbkey=CDS]
Sequence

ATGGGTTCTGATGCGGATATGGAGGATTACGGATTCGAGTACTCGGACGAGGAGCAGGAA
GAGCAAGATGTTGATATCGAGAATCAATGCTACAATTCCAAAGGTTTGGTCGAAACTGAT
CCCGAAGGAGCACTTGAGGGTTTTGCTGAAGTAGTACGTATGGAACCTGAGAAGGCAGAG
TGGGGATTTAAAGCTTTAAAGCAAACTGTTAAGCTTTACTATAAGCTAGGGAAGTACAAG
GAAATGATGGATGCTTATCGAGAAATGCTGACCTACATAAAATCGGCTGTGACACGGAAC
TATAGTGAGAAGTGTATAAACAGTATTATGGATTTTGTTTCTGGATCAGCTAGTCAGAAC
TTCAGCTTTCTGCAGGAGTTCTACCAGACAACACTGAAAGCCCTTGAAGAGGCTAAGAAT
GAGAGGTTATGGTTCAAGACGAATCTAAAGCTTTGCCAGATTTGGTTTGACATGGGGGAA
TATGGACGAATGAGCAAGATTCTGAAAGAGCTCCACAAATCTTGTAAGAAAGAAGATGGC
ACTGATGATCAGAAGAAAGGGACACAATTGTTGGAGGTATATGCAATTGAGATTCAAATG
TACACAGAGACAAAAAATAACAAAAAACTGAAGGAACTGTACAACAAAGCACTTTCAGTC
AAGTCAGCAATCCCTCATCCAAGAATAATGGGAATCATTCGCGAATGTGGAGGTAAAATG
CATATGGCGGAGAGAAAGTGGGCAGAGGCAGCTACAGACTTCTTTGAAGCTTTCAAGAAC
TATGATGAAGCTGGGAATCATAGGCGTATCCAGTGCCTAAAGTACTTGGTTCTGGCAAAT
ATGCTGATGGAGTCTGAAGTTAACCCTTTTGATGGTCAAGAAGCTAAACCTTACAAAAAT
GACCCTGAGATATTGGCAATGACAAACCTTATCGCAGCATATCAACGAAATGAGATCTTG
GAGTTCGAGAAAATTCTTAAGAGTAACAGACGGACAATAATGGATGACCCATTCATTCGG
AATTACATTGAAGATCTTTTGAGGAATGTCAGAACCCAGGTTTTACTGAAGCTCATCAAG
CCTTACACAAGAATCCGGATTCCCTTCATATCCAAGGAGCTGAATGTGCCAGAAAAAGAC
GTTGAGGACTTGTTGGTCTCCCTAATCTTGGATAACCGGATTGATGGCCACATTGATCAA
GTGAACCGGCTGCTAGAGCGTGGCGACAGATCAAAAGGGATGAAGAAGTATACTGCCATA
GATAAATGGAACACACAACTAAGGTCTCTCTACCAAACTGTTGGCAACAGAGTATGTTGA

Peptide Sequence

PEP ID

XP_016487072.1
PEP Infomation

PREDICTED: COP9 signalosome complex subunit 2-like [Nicotiana tabacum]
Sequence

MGSDADMEDYGFEYSDEEQEEQDVDIENQCYNSKGLVETDPEGALEGFAEVVRMEPEKAE
WGFKALKQTVKLYYKLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINSIMDFVSGSASQN
FSFLQEFYQTTLKALEEAKNERLWFKTNLKLCQIWFDMGEYGRMSKILKELHKSCKKEDG
TDDQKKGTQLLEVYAIEIQMYTETKNNKKLKELYNKALSVKSAIPHPRIMGIIRECGGKM
HMAERKWAEAATDFFEAFKNYDEAGNHRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKN
DPEILAMTNLIAAYQRNEILEFEKILKSNRRTIMDDPFIRNYIEDLLRNVRTQVLLKLIK
PYTRIRIPFISKELNVPEKDVEDLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTAI
DKWNTQLRSLYQTVGNRVC

Transcript Sequence

Gene sequence data has not been registered.